PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01994
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 308aa    MW: 33940.6 Da    PI: 7.9505
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01994genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.2e-49111461128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
               lppGfrFhP d+elv +yL +k+ g             +     ++ +vd++k+ePwdLp+ +  + kewyf+s rd+kyatg+r+nrat+sgyWkatgkd
  EMT01994  11 LPPGFRFHPLDDELVLDYLSRKLGGGAggaaaavA---SiygcpAMVDVDLNKIEPWDLPEIACIGGKEWYFYSLRDRKYATGQRTNRATESGYWKATGKD 108
               79**********************99976654441...15666579**************7666789********************************** PP

       NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
               +++ + kg lvg++ktLvfy+grapkg+kt+Wvmhe+r 
  EMT01994 109 RAISR-KGLLVGMRKTLVFYEGRAPKGKKTEWVMHEFRK 146
               ***99.999****************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.94E-582169IPR003441NAC domain
PROSITE profilePS5100554.00311169IPR003441NAC domain
PfamPF023651.2E-2412145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MSSLSMVEAR LPPGFRFHPL DDELVLDYLS RKLGGGAGGA AAAVASIYGC PAMVDVDLNK  60
IEPWDLPEIA CIGGKEWYFY SLRDRKYATG QRTNRATESG YWKATGKDRA ISRKGLLVGM  120
RKTLVFYEGR APKGKKTEWV MHEFRKEGQG DLMKLPLKED WVLCRVFYKT RTTIAKAPTG  180
SSYNIDSAAA TSLPPLIDNN YIAFDHPAMS TVQNLEGYEQ VPCFSNGPSS HPSSSASMNI  240
PVTAMAPMAA DQEQQHMGKA IKDALSQLTR FEQGNVKREA PAQGGVFAQD GFEYLAESGF  300
SQMWNSLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-49816912168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM0275720.0HM027572.1 Triticum aestivum NAC transcription factor 7 (NAC7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563412.10.0PREDICTED: NAC domain-containing protein 21/22-like
SwissprotQ84TE63e-87NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLR7VZP20.0R7VZP2_AEGTA; NAC domain-containing protein 21/22
STRINGMLOC_53744.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101237138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.22e-86NAC domain containing protein 1